BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039E10SP1|AL430721
(963 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig961 1593 0.0
>3x_Contig961
Length = 4343
Score = 1593 bits (803), Expect = 0.0
Identities = 837/845 (99%), Gaps = 3/845 (0%)
Strand = Plus / Plus
Query: 122 caccagtacactgacgctcgtaataaaaatcgtggcgagcgcggca-gtttcaatagcaa 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 9 caccagtacactgacgctcgtaataaaaatcgtggcgagcgcggcaagtttcaatagcaa 68
Query: 181 tagttcaacctcaggcactactcgatcttcttcccacaaggccagtgttcaaaggatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 tagttcaacctcaggcactactcgatcttcttcccacaaggccagtgttcaaaggatgga 128
Query: 241 agaaattaatctgtacatggcccaattaatgcatcgcggaggaacagaagatctttcgcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 agaaattaatctgtacatggcccaattaatgcatcgcggaggaacagaagatctttcgcg 188
Query: 301 taacactaccgataacactcatcaaccgatatcacatgatatcatgagttaatggaactc 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 189 taacactaccgataacactcatcaaccgatatcacatgatatcatgagtcaatggaactc 248
Query: 361 ctcatcccaaaataaaggacctagcactcaaaccgatattaatagtaacacttaggaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ctcatcccaaaataaaggacctagcactcaaaccgatattaatagtaacacttaggaaca 308
Query: 421 ctaactaatcttataatagtactttaatatataatttattacatgttgaatgacgcttac 480
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ctaagtagtcttataatagtactttaatatataatttattacatgttgaatgacgcttac 368
Query: 481 cggaaggagtatgttaaatcttacttttatcttagccgttagaaagtgtaaatgcttgaa 540
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cggaaggagtatgtaaaatcttacttttatcttagccgttagaaagtgtaaatgcttgaa 428
Query: 541 ctcaaacaattcagaatcaagtagagttcatgtatcatgctgaaaaactgagtcgcagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ctcaaacaattcagaatcaagtagagttcatgtatcatgctgaaaaactgagtcgcagct 488
Query: 601 acacatgttagcgtgaatgctacttattatgcgaagatgtttcaactttgatagcgggat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 acacatgttagcgtgaatgctacttattatgcgaagatgtttcaactttgatagcgggat 548
Query: 661 gatgtctcgaataaggaaaacaaaaaaaactagaattaatagttaaggattcagtataaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gatgtctcgaataaggaaaacaaaaaaaactagaattaatagttaaggattcagtataaa 608
Query: 721 aaggacacgggatggaaaatagttgaaacaaacttttgggaaagcgcggaagtgaagaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aaggacacgggatggaaaatagttgaaacaaacttttgggaaagcgcggaagtgaagaac 668
Query: 781 aacggtcgaaccccaagattggtgatacgaatatacaccaccgtgcgaggttgtaaggtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aacggtcgaaccccaagattggtgatacgaatatacaccaccgtgcgaggttgtaaggtt 728
Query: 841 gcttaacgttaataaaaggagggataaggagtg-aaacagttacgagttttatatatttw 899
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 729 gcttaacgttaataaaaggagggataaggagtgaaaacagttacgagttttatatattta 788
Query: 900 ttcatttctgtctggc-acattgaaggaacaaaaaagagactatcagaaccgctaagtgt 958
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 ttcatttctgtctggcaacattgaaggaacaaaaaagagactatcagaaccgctaagtgt 848
Query: 959 ctatt 963
|||||
Sbjct: 849 ctatt 853
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7364
Number of Sequences: 1807
Number of extensions: 7364
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)